Abstract
There are two major classes of bacteria, which
are identified by the response of the bacterial
cell wall to a staining procedure using with gentian
violet dye. This procedure was developed more
than 100 years ago by a Danish physician, Hans
C.J. Gram. The bacteria that are exposed to the
dye and retain it are gram-positive; those that
do not, gram-negative. Thus, "gram,"
in this context, has nothing to do with a measurement
of weight.
The penetration or non-penetration of the stain
depends on the structure of the bacterial cell
walls. Gram-negative bacteria have a thick outer
membrane that coats the walls.
Antibiotics are of microbial origin. They have
therefore been present in the environment and
have played a role in the wars between microbes
for a long time. However, the rapid emergence
of antibiotic resistance in previously susceptible
organisms is a phenomenon that has occurred since
these agents have been used prophylactically and
therapeutically in infectious diseases in animals
and man, and as growth factors in animal husbandry.
Although resistance to antimicrobial agents has
emerged in viruses (eg, herpes simplex virus),
bacteria, fungi, and parasites (eg, Plaszmodium
falciparum), this review will address only resistance
in bacteria.
Introduction
Bacteria can rapidly change their genetic material,
which allows the development of antimicrobial
resistance. They accomplish this in two main ways--first
by their rapid multiplication and high mutation
rate, and second by their ability to acquire genetic
material from external sources.
Antibiotics are unique among therapeutic agents
in that their desired effect is directed at an
invading microorganism, rather than at a physiologic
process of the host. Antibiotic resistance, a
major adverse effect of antibiotic usage, is an
effect on the microbial environment rather than
a direct effect on the host.
Because microorganisms leave an individual host
and enter the community, the emergence of resistance
within the host will ultimately affect the community.
We have depended on the pharmaceutical industry
to continue to provide us with new antimicrobial
agents to which bacteria have not developed resistance.
This may be an unrealistic expectation. In fact,
we may be entering the "postantibiotic era."
In this review the biochemical mechanisms by which
bacteria exhibit resistance to antimicrobial agents
and the methods of spread of resistance are discussed,
and several important examples of this problem
are provided.
Antibiotic resistance is not an all-or-none phenomenon.
A low degree of resistance may be detected by
a slight increase in the minimal inhibitory concentration
(MIC) for the antibiotic from the usual value,
which is not necessarily of clinical significance.
A high degree of resistance is characterized by
an MIC that exceeds, sometimes by many orders
of magnitude, the concentration of drug safely
attainable in the patient's tissues.
Gram Negative Bacteria
The Enterobacteriaceae and nonfermenters such
as Pseudomonas aeruginosa and Acinetobacter sp
account for a significant proportion of bacterial
isolates from clinical specimens, especially those
obtained from hospitalized patients. Many of these
bacteria exhibit resistance to multiple classes
of antimicrobial agents as a result of all the
different mechanisms discussed. Although a major
problem in hospitalized patients, this is by no
means a problem confined to hospitals, because
bacteria colonizing hospitalized patients are
carried to the community at large. Furthermore,
bacteria with the potential for causing epidemic
disease, especially in countries where sanitation
is poor, have shown significant antibiotic resistance.
These include Shigella sp resistant to ampicillin
and to trimethoprim/sulfamethoxazole; Salmonella
typhi resistant to ampicillin, chloramphenicol,
and trimethoprim/sulfamethoxazole; and nontyphoid
salmonellae resistant to multiple antibiotics.
Haemophilus influenzae
The capsular serotype b (HIB) of this species
was the most common cause of bacterial meningitis
in children in the United States before the widespread
use of HIB vaccines. The nonencapsulated (nontypeable)
strains of this organism are still common causes
of otitis media and acute exacerbations of respiratory
illness in individuals with chronic bronchitis.
In the 1970s ampicillin resistance mediated by
TEM-1 beta-lactamase emerged, so that chloramphenicol
became the primary treatment of H influenzae meningitis.
Chloramphenicol resistance emerged in the late
1970s; however, by this time it became largely
replaced by second- and then third-generation
cephalosporins as therapy for systemic H influenzae
infections. In the same manner as this organism
acquired the gene for TEM-1 beta-lactamase, it
could acquire the gene for TEM-3 or for other
broad-spectrum beta-lactamases, which would render
it resistant to third-generation cephalosporins.
Neisseria gonorrhoeae
This organism is spread rapidly by sexual contact.
As a result of its acquisition of the gene for
TEM-1 beta-lactamase production, penicillin therapy
is no longer reliable. Tetracycline resistance
is also widespread. Currently, the third-generation
cephalosporin ceftriaxone is the recommended treatment
of infections caused by this organism. Acquisition
of a gene mediating resistance to this agent,
eg, TEM-3 beta-lactamase, would make treatment
of patients infected with this organism more difficult.
Neisseria meningitidis
This is one of the most feared of bacteria because
of its ability to cause meningitis and fulminating
septicemia. Penicillin has been the treatment
of meningococcal infections for many years. Recently,
strains of decreased susceptibility to penicillin
have been recognized. The mechanism of resistance
in these strains is a decrease in the affinity
of penicillin for PBP 2, resulting from genetic
recombinations. The concerns relating to H influenzae
and to N gonorrhoeae also apply to N meningitidis.
Biochemical Mechanisms Of Antimicrobial Resistance
In Bacteria
The molecular sites at which the most commonly
used antimicrobial agents exert their antibacterial
effects are as follows: the beta-lactams (penicillins
and cephalosporins) and glycopeptides (vancomycin
and teicoplanin) inhibit cell-wall synthesis;
the macrolides (erythromycin, clarithromycin and
azithromycin), clindamycin, and chloramphenicol
inhibit protein synthesis at the 50S subunit of
the ribosome; the aminoglycosides (streptomycin,
gentamicin, and amikacin) and tetracyclines inhibit
protein synthesis at the 30S subunit of the ribosome;
rifampin inhibits DNA-directed RNA polymerase;
the fluoroquinolones inhibit DNA gyrase; and trimethoprim
and sulfonamides inhibit folate synthesis.
There are four main mechanisms by which bacteria
exert resistance to antimicrobial agents: (1)
barrier to entry, preventing the drug from reaching
its target; (2) rapid extrusion of the drug; (3)
enzymatic modification or hydrolysis of the drug,
rendering it inactive; and (4) alteration of the
molecular target of the drug? Other mechanisms
are sequestration of the drug by protein binding;
bypassing of the metabolic process inhibited by
the drug; and overproduction of the enzyme inhibited
by the drug. The last two mechanisms can result
in resistance to the folate antagonists. More
than one mechanism can operate at one time, resulting
in an increased degree of resistance.
Barrier to Entry
This constitutes an important mechanism of resistance
in gram-negative bacteria. Decreased entry of
a drug into the organism, in addition to alteration
or destruction of whatever amount of drug is able
to enter, can result in high degrees of resistance.
The entry of antibiotics as well as other complex
molecules into gram-negative bacteria requires
a pathway through the lipopolysaccharide outer
membrane. Protein channels called porins provide
this pathway. The ability of molecules to pass
through these channels is influenced by their
size, shape, and electrical charge. Decreased
entry of antibiotic into the bacterial cell is
not important in gram-positive bacteria because
they lack a lipopolysaccharide outer membrane.
Although the peptidoglycan layer of gram-positive
bacteria is thicker than that of gram-negative,
it does not pose a significant barrier to antibiotic
entry.
Rapid Extrusion (Efflux Mechanism)
This is an energy-dependent mechanism whereby
a bacterium can pump out an antibiotic from its
interior so that it does not accumulate and cannot
exert its antibacterial effect. This is best recognized
as a mechanism of tetracycline resistance, but
has also been demonstrated as one mechanism of
resistance to macrolides, chloramphenicol, and
fluoroquinolones.
Enzymatic Modification of the Drug
This is the most important mechanism of resistance
to beta-lactams, aminoglycosides, and chloramphenicol.
The enzymes are often plasmid-encoded, but they
may be chromosome-encoded.
beta-lactam-modifying enzymes. Of the three types
of these enzymes, namely beta-lactamase, acylase,
and esterase, beta-lactamase is by far the most
important. These enzymes hydrolyze the beta-lactam
bond of penicillins and cephalosporins, rendering
the drugs inactive. There are many different beta-lactamases.
No beta-lactam antibiotic is immune to the effects
of every beta-lactamase. As a new beta-lactam
agent enters clinical usage, one can expect a
beta-lactamase to appear that can hydrolyze it.
beta-lactamases may be primarily penicillinases
or cephalosporinases, broad-spectrum or narrow-spectrum,
chromosome-encoded or plasmid-encoded, and constitutive
(ie, produced at all times) or inducible (ie,
produced only when stimulated to do so). Some
gram-positive bacteria produce beta-lactamase,
in which case it is excreted into the external
environment. These include Staphylococcus aureus,
coagulase-negative staphylococci, Enterococcus
faecalis, and Bacillus cereus, all of whose enzymes
are primarily penicillinases, as well as Nocardia
sp and Mycobacterium sp. Many gram-negative bacteria
produce this enzyme, which is excreted into the
periplasmic space. These bacteria include all
members of the Enterobacteriaceae, Pseudomonas
sp, Xanthomonas maltophilia, Acinetobacter sp,
Moraxella catarrhalis, Haemophilus influenzae,
Legionella sp, Neisseria gonorrhoeae, and Bacteroides
sp.
Of particular note are two groups of broad-spectrum
beta-lactamases produced by some gram-negative
bacteria. The first are the broad-spectrum, inducible,
chromosome-encoded beta-lactamases of Enterobacter
sp, Citrobacter sp, Serratia sp, Morganella morganii,
and Pseudomonas aeruginosa. The genes for these
beta-lactamases are repressed, and induction occurs
when the organism is exposed to certain beta-lactam
drugs (eg, cefotaxime) that derepress the gene.
However, the gene may become stably derepressed,
resulting in constitutive production of large
quantifies of the enzyme. These enzymes are active
against all beta-lactams except imipenem. The
second group is composed of plasmid-encoded broad-spectrum
beta-lactamases active against the newer cephalosporins,
eg, cefotaxime and ceftazidime. These are derived
from mutations of genes coding for more narrow-spectrum
beta-lactamases. Mutations of one or two nucleotides
can result in major changes in the spectrum of
activity of the enzyme.
Aminoglycoside-modifying enzymes. Amino-glycosides
have several amino and hydroxyl side groups that
are susceptible to enzymatic modification. The
responsible enzymes, namely aminoglycoside acetyltransferases,
phosphotransferases, and adenyltransferases, are
specific for the amino or hydroxyl groups at specific
sites. They may be active at analogous sites on
different aminoglycosides, result-mg m cross-resistance
between drugs.
Chloramphenicol acetyltransferase results in
inactivation of this drug.
Alteration of the Target
beta-Lactams. The targets of the beta-lactam antibiotics
are penicillin-binding proteins (PBPs). These
are enzymes, namely peptidoglycan transpeptidases,
transglycolases, and carboxypeptidases that are
located in the cytoplasmic membrane and that result
in the formation of the cross-linkages of the
peptidoglycan of the bacterial cell wall. Different
beta-lactams have different affinities for different
PBPs. The following are important examples of
beta-lactam resistance as a result of altered
PBPs, most of which are due to decreased binding
of the beta-lactam by the PBP: (1) penicillin
resistance in Streptococcus pneumoniae, and Neisseria
meningitidis; (2) methicillin resistance in Staphylococcus
aureus; (3) non-beta-lactamase-mediated penicillin
resistance in Neisseria gonorrhoeae and ampicillin
resistance in Haemophilus influenzae. The relative
resistance of enterococci to penicillins and their
resistance to cephalosporins is due to the low
affinity of these drugs for enterococcal PBPs.
Aminoglycosides. Mutations of the aminoglycoside-binding
site on the 30S subunit of the ribosome can result
in resistance, primarily in the cases of streptomycin
and spectinomycin.
Macrolides. Methylation of an adenine moiety of
the 23S ribosomal RNA results in resistance.
Fluoroquinolones. Alteration of the A subunit
of DNA gyrase results in failure of the antibiotic
to bind to it.
Folate antagonists. Of the several mechanisms
by which sulfonamides and trimethoprim exhibit
antimicrobial resistance, the most important is
alteration of the enzymes they inhibit, namely
dihydropteroate synthetase and dihydrofolate reductase,
respectively.
Means By Which Bacteria Become Resistant To Antibiotics
Antibiotic resistance, like any other phenotypic
characteristic, is determined by the bacterial
genome. This may change as a result of mutation
or by acquisition of new genetic material. Bacteria
multiply rapidly, some having generation times
as short as 30 minutes. They have genetic mutations
every 106 to 109 divisions, resulting in the frequent
opportunity for a mutation and thus for antibiotic
resistance. The acquisition of new genetic material
occurs by three mechanisms. The first is conjugation,
in which a plasmid is passed from one organism
to another through a pilus. This can occur not
only between individual bacteria of the same strain
or species, but also between bacteria of different
genera or families. For example, the TEM-1 gene
encoding for penicillinase production emerged
initially in Escherichia coli and spread to Haemophilus
influenzae and to Neisseria gonorrhoeae, resulting
in penicillin and ampicillin resistance in these
organisms. This method of spread of antibiotic
resistance genes is also called "infectious
drug resistance." The spread of genes coding
for antibiotic resistance is facilitated by mobile
genetic elements called transposons, which can
move from plasmids to the bacterial chromosome,
and in the reverse direction t. The second mechanism
by which bacteria acquire new genetic material
is transformation, in which DNA is assimilated
from the external environment. The third is transduction,
in which genetic material is acquired from an
infecting bacteriophage.
Mechanism By Which Resistant Bacteria Spread
Antibiotic resistance spreads both as a result
of resistance genes spreading (infectious drug
resistance) and, of much greater importance, as
a result of resistant bacteria spreading. The
latter occurs in the same way as susceptible bacteria
spread, from individual to individual. This is
particularly important within hospitals, where
antibiotic-resistant bacteria are more prevalent
than in the outside community and where bacterial
spread from patient to patient is facilitated
by carriage on the hands of staff. However, in
this era of rapid international travel, resistant
bacteria can be readily spread around the world?
How Do Resistant Bacteria Wax Mighty?
The method by which antibiotic-resistant bacteria
become prevalent within a bacterial population
is by natural selection. This idea was described
by Charles Darwin in 1859, in his book The Origin
of Species by Natural Selection. The presence
of antibiotics in the environment of a bacterial
population places a selective pressure on any
resistant bacteria to survive and become the predominant
population. in a bacterial population in which
there are individual bacteria resistant to two
antibiotics simultaneously, exposure of the population
to only one of these antibiotics will select for
bacteria resistant to both.
The Role Of Physicians In Spreading Antibiotic
Resistance
Physicians play an important role in increasing
the prevalence of antibiotic-resistant bacteria
by spreading bacteria from patient to patient
and by their prescribing practices regarding antibiotics.
We often prescribe antibiotics for patients who
might have a bacterial infection that could become
worse if untreated.
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